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DatoValore
TitleMetatranscriptomic outlook on green and brown food webs in acid mine drainage
AbstractAcid mine drainages (AMDs), metal-rich acidic effluents generated by mining activities, are colonized by prokaryotic and eukaryotic microorganisms widely distributed among different phyla. We compared metatranscriptomic data from two sampling stations in the Carnoulès AMD and from a third station in the nearby Amous River, focussing on processes involved in primary production and litter decomposition. A synergistic relationship between the green and brown food webs was favoured in the AMD sediments by the low carbon content and the availability of mineral nutrients: primary production of organic matter would benefit C-limited decomposers whose activity of organic matter mineralization would in turn profit primary producers. This balance could be locally disturbed by heterogeneous factors such as an input of plant debris from the riparian vegetation, strongly boosting the growth of Tremellales which would then outcompete primary producers. In the unpolluted Amous River on the contrary, the competition for limited mineral nutrients was dominated by the green food web, fish and bacterivorous protists having a positive effect on phytoplankton. These results suggest that in addition to direct effects of low pH and metal contamination, trophic conditions like carbon or mineral nutrient limitations also have a strong impact on assembly and activities of AMDs' microbial communities.
SourceEnvironmental microbiology reports 13, pp. 606–615
KeywordsMetatranscriptomicacid mine drainage
JournalEnvironmental microbiology reports
EditorWiley-Blackwell, [Oxford], Stati Uniti d'America
Year2021
TypeArticolo in rivista
DOI10.1111/1758-2229.12958
AuthorsPlewniak F.; Crognale S.; Bruneel O.; Sismeiro O.; Coppee J.-Y.; Rossetti S.; Bertin P.
Text458523 2021 10.1111/1758 2229.12958 Scopus 2 s2.0 85105463666 Metatranscriptomic acid mine drainage Metatranscriptomic outlook on green and brown food webs in acid mine drainage Plewniak F.; Crognale S.; Bruneel O.; Sismeiro O.; Coppee J. Y.; Rossetti S.; Bertin P. Genetique Moleculaire, Genomique et Microbiologie, UMR7156, CNRS University of Strasbourg, Strasbourg, Genetique Moleculaire, Genomique et Microbiologie, UMR7156, CNRS University of Strasbourg, Strasbourg, France, , , , France; Genetique Moleculaire, Genomique et Microbiologie, UMR7156, CNRS University of Strasbourg, Strasbourg, Genetique Moleculaire, Genomique et Microbiologie, UMR7156, CNRS University of Strasbourg, Strasbourg, France, , , , France; Genetique Moleculaire, Genomique et Microbiologie, UMR7156, CNRS University of Strasbourg, Strasbourg, Genetique Moleculaire, Genomique et Microbiologie, UMR7156, CNRS University of Strasbourg, Strasbourg, France, , , , France; Istituto di Ricerca Sulle Acque, Consiglio Nazionale Delle Ricerche, Rome, Istituto di Ricerca Sulle Acque, Consiglio Nazionale Delle Ricerche, Rome, Italy, , , Italy; Istituto di Ricerca Sulle Acque, Consiglio Nazionale Delle Ricerche, Rome, Istituto di Ricerca Sulle Acque, Consiglio Nazionale Delle Ricerche, Rome, Italy, , , Italy; HydroSciences Montpellier, University of Montpellier CNRS IRD, Montpellier, HydroSciences Montpellier, University of Montpellier CNRS IRD, Montpellier, France, , , , , France; HydroSciences Montpellier, University of Montpellier CNRS IRD, Montpellier, HydroSciences Montpellier, University of Montpellier CNRS IRD, Montpellier, France, , , , , France; HydroSciences Montpellier, University of Montpellier CNRS IRD, Montpellier, HydroSciences Montpellier, University of Montpellier CNRS IRD, Montpellier, France, , , , , France; HydroSciences Montpellier, University of Montpellier CNRS IRD, Montpellier, HydroSciences Montpellier, University of Montpellier CNRS IRD, Montpellier, France, , , , , France; Institut Pasteur, Transcriptome and Epigenome Platform, Biomics Pole, Paris, Institut Pasteur, Transcriptome and Epigenome Platform, Biomics Pole, Paris, France, , France; Unite de Biologie des Bacteries Pathogenes a Gram Positif, Institut Pasteur, Paris, Unite de Biologie des Bacteries Pathogenes a Gram Positif, Institut Pasteur, Paris, France, , France; Biologie des ARN des Pathogenes Fongiques, Institut Pasteur, Paris, Biologie des ARN des Pathogenes Fongiques, Institut Pasteur, Paris, France, , France Acid mine drainages AMDs , metal rich acidic effluents generated by mining activities, are colonized by prokaryotic and eukaryotic microorganisms widely distributed among different phyla. We compared metatranscriptomic data from two sampling stations in the Carnoules AMD and from a third station in the nearby Amous River, focussing on processes involved in primary production and litter decomposition. A synergistic relationship between the green and brown food webs was favoured in the AMD sediments by the low carbon content and the availability of mineral nutrients primary production of organic matter would benefit C limited decomposers whose activity of organic matter mineralization would in turn profit primary producers. This balance could be locally disturbed by heterogeneous factors such as an input of plant debris from the riparian vegetation, strongly boosting the growth of Tremellales which would then outcompete primary producers. In the unpolluted Amous River on the contrary, the competition for limited mineral nutrients was dominated by the green food web, fish and bacterivorous protists having a positive effect on phytoplankton. These results suggest that in addition to direct effects of low pH and metal contamination, trophic conditions like carbon or mineral nutrient limitations also have a strong impact on assembly and activities of AMDs microbial communities. 13 Published version http //www.scopus.com/record/display.url eid=2 s2.0 85105463666 origin=inward Articolo in rivista Wiley Blackwell 1758 2229 Environmental microbiology reports Environmental microbiology reports Environ. microbiol. rep. Environmental microbiology reports simona.rossetti ROSSETTI SIMONA simona.crognale CROGNALE SIMONA