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TitleGenome sequence of obligate marine polycyclic aromatic hydrocarbons-degrading bacterium Cycloclasticus sp. 78-ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea.
AbstractCycloclasticus sp. 78-ME isolated from petroleum deposits of the sunken tanker "Amoco Milford Haven" (Gulf of Genoa, Ligurian Sea, Italy) could effectively degrade polycyclic aromatic hydrocarbons of up to five condensed rings. The genome of 78-ME was sequenced and analysed to gain insights into its remarkable degrading capacities. It comprises two circular replicons, the 2,613,078 bp chromosome and the plasmid of 42,347 bp, with 41.84% and 53.28% of the G + C content respectively. A total of 2585 protein-coding genes were obtained, and three large operons with more than fifteen enzymes belonging to four different classes of ring-cleavage dioxygenases were found.
SourceMarine genomics (Online) 25, pp. 11–13
KeywordsObligate marine hydrocarbonoclastic bacteria; Cycloclasticus sp.; Polycyclic aromatic hydrocarbons-degrading; Genome sequence
JournalMarine genomics (Online)
EditorElsevier, Amsterdam, Paesi Bassi
Year2016
TypeArticolo in rivista
DOI10.1016/j.margen.2015.10.006
AuthorsMessina, Enzo; Denaro, Renata; Crisafi, Francesca; Smedile, Francesco; Cappello, Simone; Genovese, Maria; Genovese, Lucrezia; Giuliano, Laura; Russo, Daniela; Ferrer, Manuel; Golyshin, Peter; Yakimov, Michail M
Text349515 2016 10.1016/j.margen.2015.10.006 ISI Web of Science WOS 26508673 Obligate marine hydrocarbonoclastic bacteria; Cycloclasticus sp.; Polycyclic aromatic hydrocarbons degrading; Genome sequence Genome sequence of obligate marine polycyclic aromatic hydrocarbons degrading bacterium Cycloclasticus sp. 78 ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea. Messina, Enzo; Denaro, Renata; Crisafi, Francesca; Smedile, Francesco; Cappello, Simone; Genovese, Maria; Genovese, Lucrezia; Giuliano, Laura; Russo, Daniela; Ferrer, Manuel; Golyshin, Peter; Yakimov, Michail M a Institute for Coastal Marine Environment, CNR, 98122 Messina, Italy b Institute of Catalysis, CSIC, 28049, Madrid, Spain c School of Biological Sciences, Bangor University, Deiniol Road, Bangor, LL57 UW, Gwynedd, United Kingdom Cycloclasticus sp. 78 ME isolated from petroleum deposits of the sunken tanker Amoco Milford Haven Gulf of Genoa, Ligurian Sea, Italy could effectively degrade polycyclic aromatic hydrocarbons of up to five condensed rings. The genome of 78 ME was sequenced and analysed to gain insights into its remarkable degrading capacities. It comprises two circular replicons, the 2,613,078 bp chromosome and the plasmid of 42,347 bp, with 41.84% and 53.28% of the G C content respectively. A total of 2585 protein coding genes were obtained, and three large operons with more than fifteen enzymes belonging to four different classes of ring cleavage dioxygenases were found. 25 Published version Messina et al. 2016 article 1 s2.0 S1874778715300398 main.pdf Articolo in rivista Elsevier 1876 7478 Marine genomics Online Marine genomics Online Marine genomics. Online lucrezia.genovese GENOVESE LUCREZIA laura.giuliano GIULIANO LAURA mikhail.iakimov IAKIMOV MIKHAIL renata.denaro DENARO RENATA simone.cappello CAPPELLO SIMONE maria.genovese GENOVESE MARIA enzo.messina MESSINA ENZO francesco.smedile SMEDILE FRANCESCO francesca.crisafi CRISAFI FRANCESCA